MolNFT v1 · #290947 · protein
AlphaFold monomer V2.0 prediction for PDZ and lim domain protein 1 (P52944)
P52944: “AlphaFold monomer V2.0 prediction for PDZ and lim domain protein 1 (P52944)”. 3 pockets (best druggability 0.49). MolNFT v1 #290947 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P52944
- Type
- protein
- Length
- 327 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5881B09f2D8e743400698633641fc1cD2Ed2BE6F
- Molecule
- PDZ and lim domain protein 1
- UniProt
- P52944
- Pockets
- 3 · best druggability 0.49
Structure
1 distinct chain · 22% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | PDZ and lim domain protein 1 | protein | 327 | 22% helix, 17% strand | P52944 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 236 | 0.49 | 0.74 | 29 | empty |
| 2 | 111 | 0.37 | 0.74 | 17 | empty |
| 3 | 66 | 0.34 | 0.76 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P52944
- Elsewhere: UniProt P52944 · AlphaFold DB P52944
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.