MolNFT v1 · #290461 · protein
AlphaFold monomer V2.0 prediction for prostaglandin D2 receptor (Q13258)
Q13258: “AlphaFold monomer V2.0 prediction for prostaglandin D2 receptor (Q13258)”. 5 pockets (best druggability 0.79). MolNFT v1 #290461 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q13258
- Type
- protein
- Length
- 359 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xF073c1CC92034BC09E513714E771861c9730419A
- Molecule
- Prostaglandin D2 receptor
- UniProt
- Q13258
- Pockets
- 5 · best druggability 0.79
Structure
1 distinct chain · 74% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Prostaglandin D2 receptor | protein | 359 | 74% helix, 3% strand | Q13258 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 152 | 0.79 | 0.95 | 33 | empty |
| 2 | 479 | 0.72 | 0.81 | 46 | empty |
| 3 | 67 | 0.38 | 0.78 | 15 | empty |
| 4 | 118 | 0.37 | 0.74 | 15 | empty |
| 5 | 58 | 0.30 | 0.76 | 16 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q13258
- Elsewhere: UniProt Q13258 · AlphaFold DB Q13258
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