MolNFT v1 · #290460 · protein
AlphaFold monomer V2.0 prediction for prostaglandin D2 receptor (A5D7K8)
A5D7K8: “AlphaFold monomer V2.0 prediction for prostaglandin D2 receptor (A5D7K8)”. 5 pockets (best druggability 0.79). MolNFT v1 #290460 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- A5D7K8
- Type
- protein
- Length
- 361 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xA0f5ea066576302D69daD07dD048eA72B2b46B7e
- Molecule
- Prostaglandin D2 receptor
- UniProt
- A5D7K8
- Pockets
- 5 · best druggability 0.79
Structure
1 distinct chain · 72% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Prostaglandin D2 receptor | protein | 361 | 72% helix, 3% strand | A5D7K8 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 132 | 0.79 | 0.97 | 28 | empty |
| 2 | 453 | 0.70 | 0.80 | 43 | empty |
| 3 | 144 | 0.45 | 0.76 | 21 | empty |
| 4 | 85 | 0.40 | 0.78 | 23 | empty |
| 5 | 77 | 0.32 | 0.73 | 17 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5D7K8
- Elsewhere: UniProt A5D7K8 · AlphaFold DB A5D7K8
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