MolNFT v1 · #289103 · protein
AlphaFold monomer V2.0 prediction for penicillin-binding protein 2D (P70997)
P70997: “AlphaFold monomer V2.0 prediction for penicillin-binding protein 2D (P70997)”. 9 pockets (best druggability 0.57). MolNFT v1 #289103 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P70997
- Type
- protein
- Length
- 691 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9e5E98E011361C5888c92e2CDb7652E02Bd5C7Ed
- Molecule
- Penicillin-binding protein 2D
- UniProt
- P70997
- Pockets
- 9 · best druggability 0.57
Structure
1 distinct chain · 44% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Penicillin-binding protein 2D | protein | 691 | 44% helix, 13% strand | P70997 |
Pockets
9 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 278 | 0.57 | 0.77 | 36 | empty |
| 2 | 339 | 0.53 | 0.74 | 52 | empty |
| 3 | 246 | 0.51 | 0.75 | 28 | empty |
| 4 | 152 | 0.48 | 0.77 | 23 | empty |
| 5 | 176 | 0.46 | 0.75 | 29 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P70997
- Elsewhere: UniProt P70997 · AlphaFold DB P70997
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