MolNFT v1 · #289041 · protein
AlphaFold monomer V2.0 prediction for probable peptidoglycan D,D-transpeptidase pena (P16873)
P16873: “AlphaFold monomer V2.0 prediction for probable peptidoglycan D,D-transpeptidase pena (P16873)”. 3 pockets (best druggability 0.60). MolNFT v1 #289041 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P16873
- Type
- protein
- Length
- 400 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x55b468e9e2CCC5CDED0905bAb86BaC078d1E89f0
- Molecule
- Probable peptidoglycan D,D-transpeptidase pena
- UniProt
- P16873
- Pockets
- 3 · best druggability 0.60
Structure
1 distinct chain · 33% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable peptidoglycan D,D-transpeptidase pena | protein | 400 | 33% helix, 22% strand | P16873 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 387 | 0.60 | 0.76 | 36 | empty |
| 2 | 130 | 0.58 | 0.84 | 27 | empty |
| 3 | 203 | 0.48 | 0.75 | 29 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P16873
- Elsewhere: UniProt P16873 · AlphaFold DB P16873
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