MolNFT v1 · #289026 · protein
AlphaFold monomer V2.0 prediction for penicillin-binding protein 1A (P71707)
P71707: “AlphaFold monomer V2.0 prediction for penicillin-binding protein 1A (P71707)”. 6 pockets (best druggability 0.80). MolNFT v1 #289026 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P71707
- Type
- protein
- Length
- 820 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3A8dF082431E1C5999A742B17109c441A22E58fb
- Molecule
- Penicillin-binding protein 1A
- UniProt
- P71707
- Pockets
- 6 · best druggability 0.80
Structure
1 distinct chain · 37% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Penicillin-binding protein 1A | protein | 820 | 37% helix, 13% strand | P71707 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 981 | 0.80 | 0.82 | 113 | empty |
| 2 | 452 | 0.64 | 0.77 | 42 | empty |
| 3 | 266 | 0.56 | 0.77 | 34 | empty |
| 4 | 137 | 0.47 | 0.77 | 21 | empty |
| 5 | 58 | 0.27 | 0.73 | 11 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 5CRF · Structure of the penicillin-binding protein PONA1 from mycobacterium tuberculosis · an experimental structure of the same protein · chain A against A, TM-score 0.46
- 5CXW · Structure of the PONA1 protein from mycobacterium tuberculosis in complex with penicillin… · an experimental structure of the same protein · chain A against A, TM-score 0.46
- 5CXW · Structure of the PonA1 protein from Mycobacterium Tuberculosis in complex with penicillin… · an experimental structure of the same protein · chain A against A, TM-score 0.46
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P71707
- Elsewhere: UniProt P71707 · AlphaFold DB P71707
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