MolNFT v1 · #286865 · protein
AlphaFold monomer V2.0 prediction for 3-methyl-2-oxobutanoate hydroxymethyltransferase (B1YBD4)
B1YBD4: “AlphaFold monomer V2.0 prediction for 3-methyl-2-oxobutanoate hydroxymethyltransferase (B1YBD4)”. 2 pockets (best druggability 0.71). MolNFT v1 #286865 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- B1YBD4
- Type
- protein
- Length
- 261 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0D671490EE06E75975e90D7F99F73B20BE618744
- Molecule
- 3-methyl-2-oxobutanoate hydroxymethyltransferase
- UniProt
- B1YBD4
- Pockets
- 2 · best druggability 0.71
Structure
1 distinct chain · 44% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 3-methyl-2-oxobutanoate hydroxymethyltransferase | protein | 261 | 44% helix, 15% strand | B1YBD4 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 198 | 0.71 | 0.87 | 29 | empty |
| 2 | 90 | 0.41 | 0.78 | 16 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1YBD4
- Elsewhere: UniProt B1YBD4 · AlphaFold DB B1YBD4
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