MolNFT v1 · #282153 · protein
AlphaFold monomer V2.0 prediction for glycine betaine transporter opud (P54417)
P54417: “AlphaFold monomer V2.0 prediction for glycine betaine transporter opud (P54417)”. 6 pockets (best druggability 0.62). MolNFT v1 #282153 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P54417
- Type
- protein
- Length
- 512 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3160323f36CEcc42a4BfE9aCB70131D3Fc20b462
- Molecule
- Glycine betaine transporter opud
- UniProt
- P54417
- Pockets
- 6 · best druggability 0.62
Structure
1 distinct chain · 81% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glycine betaine transporter opud | protein | 512 | 81% helix, 0% strand | P54417 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 346 | 0.62 | 0.78 | 40 | empty |
| 2 | 55 | 0.35 | 0.79 | 15 | empty |
| 3 | 57 | 0.35 | 0.78 | 13 | empty |
| 4 | 81 | 0.35 | 0.74 | 15 | empty |
| 5 | 85 | 0.34 | 0.74 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P54417
- Elsewhere: UniProt P54417 · AlphaFold DB P54417
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