MolNFT v1 · #282100 · protein
AlphaFold monomer V2.0 prediction for violet-sensitive opsin (P28684)
P28684: “AlphaFold monomer V2.0 prediction for violet-sensitive opsin (P28684)”. 4 pockets (best druggability 0.83). MolNFT v1 #282100 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P28684
- Type
- protein
- Length
- 347 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x827Dcb147886372317f263288bc31c7eeFc7876c
- Molecule
- Violet-sensitive opsin
- UniProt
- P28684
- Pockets
- 4 · best druggability 0.83
Structure
1 distinct chain · 70% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Violet-sensitive opsin | protein | 347 | 70% helix, 2% strand | P28684 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 175 | 0.83 | 0.98 | 46 | empty |
| 2 | 200 | 0.61 | 0.82 | 36 | empty |
| 3 | 63 | 0.40 | 0.80 | 17 | empty |
| 4 | 98 | 0.38 | 0.75 | 16 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P28684
- Elsewhere: UniProt P28684 · AlphaFold DB P28684
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.