MolNFT v1 · #282051 · protein

AlphaFold monomer V2.0 prediction for rhodopsin (Q9YGY9)

Q9YGY9: “AlphaFold monomer V2.0 prediction for rhodopsin (Q9YGY9)”. 3 pockets (best druggability 0.81). MolNFT v1 #282051 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q9YGY9
Type: protein
Length: 352 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xbff27Dc0a932A6E0d9Fe883AAbD1BF27bB95A69F
Molecule: Rhodopsin
UniProt: Q9YGY9
Pockets: 3 · best druggability 0.81

Structure

1 distinct chain · 68% helix, 4% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Rhodopsin	protein	352	68% helix, 4% strand	Q9YGY9

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	176	0.81	0.96	33	empty
2	147	0.43	0.75	21	empty
3	78	0.42	0.80	16	empty

Modifications

Observed in the structure: 1 disulfide (disulfide).

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9YGY9
Elsewhere: UniProt Q9YGY9 · AlphaFold DB Q9YGY9

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.