MolNFT v1 · #282042 · protein

AlphaFold monomer V2.0 prediction for rhodopsin (Q9YH02)

Q9YH02: “AlphaFold monomer V2.0 prediction for rhodopsin (Q9YH02)”. 3 pockets (best druggability 0.82). MolNFT v1 #282042 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q9YH02
Type: protein
Length: 353 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xbFeCaa19bc2aB91C9e7f7ED1A59A62738Ca245fc
Molecule: Rhodopsin
UniProt: Q9YH02
Pockets: 3 · best druggability 0.82

Structure

1 distinct chain · 71% helix, 4% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Rhodopsin	protein	353	71% helix, 4% strand	Q9YH02

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	161	0.82	0.97	33	empty
2	99	0.39	0.76	17	empty
3	59	0.33	0.77	15	empty

Modifications

Observed in the structure: 1 disulfide (disulfide).

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9YH02
Elsewhere: UniProt Q9YH02 · AlphaFold DB Q9YH02

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