MolNFT v1 · #282008 · protein
AlphaFold monomer V2.0 prediction for rhodopsin (P79812)
P79812: “AlphaFold monomer V2.0 prediction for rhodopsin (P79812)”. 3 pockets (best druggability 0.81). MolNFT v1 #282008 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P79812
- Type
- protein
- Length
- 351 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb21ec8561536D7DEd13EC0Ed01b162cd7EB5dE01
- Molecule
- Rhodopsin
- UniProt
- P79812
- Pockets
- 3 · best druggability 0.81
Structure
1 distinct chain · 69% helix, 4% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rhodopsin | protein | 351 | 69% helix, 4% strand | P79812 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 132 | 0.81 | 0.98 | 29 | empty |
| 2 | 129 | 0.41 | 0.75 | 17 | empty |
| 3 | 67 | 0.39 | 0.79 | 14 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P79812
- Elsewhere: UniProt P79812 · AlphaFold DB P79812
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