MolNFT v1 · #281991 · protein
AlphaFold monomer V2.0 prediction for rhodopsin (P79863)
P79863: “AlphaFold monomer V2.0 prediction for rhodopsin (P79863)”. 3 pockets (best druggability 0.80). MolNFT v1 #281991 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P79863
- Type
- protein
- Length
- 354 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xC746AF6f646b588a47acE344208619CfEF12dD4b
- Molecule
- Rhodopsin
- UniProt
- P79863
- Pockets
- 3 · best druggability 0.80
Structure
1 distinct chain · 71% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rhodopsin | protein | 354 | 71% helix, 3% strand | P79863 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 120 | 0.80 | 0.98 | 27 | empty |
| 2 | 136 | 0.43 | 0.76 | 25 | empty |
| 3 | 51 | 0.39 | 0.81 | 12 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P79863
- Elsewhere: UniProt P79863 · AlphaFold DB P79863
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