MolNFT v1 · #281976 · protein

AlphaFold monomer V2.0 prediction for rhodopsin (Q9YGZ4)

Q9YGZ4: “AlphaFold monomer V2.0 prediction for rhodopsin (Q9YGZ4)”. 3 pockets (best druggability 0.78). MolNFT v1 #281976 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q9YGZ4
Type: protein
Length: 353 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xaa53776A41fB2e67da75A96E8a53746b6874aAB4
Molecule: Rhodopsin
UniProt: Q9YGZ4
Pockets: 3 · best druggability 0.78

Structure

1 distinct chain · 70% helix, 4% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Rhodopsin	protein	353	70% helix, 4% strand	Q9YGZ4

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	108	0.78	0.97	28	empty
2	162	0.44	0.75	18	empty
3	57	0.35	0.78	13	empty

Modifications

Observed in the structure: 1 disulfide (disulfide).

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9YGZ4
Elsewhere: UniProt Q9YGZ4 · AlphaFold DB Q9YGZ4

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