MolNFT v1 · #281966 · protein

AlphaFold monomer V2.0 prediction for rhodopsin (P22328)

P22328: “AlphaFold monomer V2.0 prediction for rhodopsin (P22328)”. 2 pockets (best druggability 0.80). MolNFT v1 #281966 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: P22328
Type: protein
Length: 351 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x5881B09f2D8e743400698633641fc1cD2Ed2BE6F
Molecule: Rhodopsin
UniProt: P22328
Pockets: 2 · best druggability 0.80

Structure

1 distinct chain · 67% helix, 3% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Rhodopsin	protein	351	67% helix, 3% strand	P22328

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	117	0.80	0.98	27	empty
2	97	0.35	0.74	17	empty

Modifications

Observed in the structure: 1 disulfide (disulfide).

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P22328
Elsewhere: UniProt P22328 · AlphaFold DB P22328

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