MolNFT v1 · #281954 · protein
AlphaFold monomer V2.0 prediction for rhodopsin (P56514)
P56514: “AlphaFold monomer V2.0 prediction for rhodopsin (P56514)”. 2 pockets (best druggability 0.80). MolNFT v1 #281954 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P56514
- Type
- protein
- Length
- 354 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd91633319BDB0a92cbC4f08DeA734Bf74C030064
- Molecule
- Rhodopsin
- UniProt
- P56514
- Pockets
- 2 · best druggability 0.80
Structure
1 distinct chain · 68% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rhodopsin | protein | 354 | 68% helix, 3% strand | P56514 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 124 | 0.80 | 0.98 | 29 | empty |
| 2 | 154 | 0.41 | 0.74 | 23 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P56514
- Elsewhere: UniProt P56514 · AlphaFold DB P56514
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.