MolNFT v1 · #281923 · protein
AlphaFold monomer V2.0 prediction for short-wave-sensitive opsin 1 (P51490)
P51490: “AlphaFold monomer V2.0 prediction for short-wave-sensitive opsin 1 (P51490)”. 5 pockets (best druggability 0.83). MolNFT v1 #281923 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P51490
- Type
- protein
- Length
- 349 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7c75F0f7d6d136A2b8D4C6C6e9b3D8a697949DF1
- Molecule
- Short-wave-sensitive opsin 1
- UniProt
- P51490
- Pockets
- 5 · best druggability 0.83
Structure
1 distinct chain · 68% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Short-wave-sensitive opsin 1 | protein | 349 | 68% helix, 2% strand | P51490 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 182 | 0.83 | 0.97 | 36 | empty |
| 2 | 535 | 0.72 | 0.81 | 58 | empty |
| 3 | 55 | 0.38 | 0.80 | 14 | empty |
| 4 | 101 | 0.36 | 0.74 | 22 | empty |
| 5 | 85 | 0.35 | 0.74 | 16 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P51490
- Elsewhere: UniProt P51490 · AlphaFold DB P51490
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