MolNFT v1 · #281211 · protein
AlphaFold monomer V2.0 prediction for outer membrane protein a (Q52657)
Q52657: “AlphaFold monomer V2.0 prediction for outer membrane protein a (Q52657)”. 8 pockets (best druggability 0.85). MolNFT v1 #281211 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q52657
- Type
- protein
- Length
- 2,021 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5c4adF1416281C09AE8eE1cbb80fF7e44cE86F97
- Molecule
- Outer membrane protein a
- UniProt
- Q52657
- Pockets
- 8 · best druggability 0.85
Structure
1 distinct chain · 4% helix, 52% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Outer membrane protein a | protein | 2021 | 4% helix, 52% strand | Q52657 |
Pockets
8 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 356 | 0.85 | 0.95 | 64 | empty |
| 2 | 59 | 0.66 | 0.95 | 21 | empty |
| 3 | 186 | 0.55 | 0.80 | 25 | empty |
| 4 | 85 | 0.55 | 0.86 | 24 | empty |
| 5 | 50 | 0.44 | 0.84 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q52657
- Elsewhere: UniProt Q52657 · AlphaFold DB Q52657
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