MolNFT v1 · #280905 · protein

AlphaFold monomer V2.0 prediction for obg-like ATPase 1 (O13998)

O13998: “AlphaFold monomer V2.0 prediction for obg-like ATPase 1 (O13998)”. 3 pockets (best druggability 0.55). MolNFT v1 #280905 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: O13998
Type: protein
Length: 392 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xbDA05C32aD6eE153C8C5A78dfa48d7Ba25694fea
Molecule: Obg-like ATPase 1
UniProt: O13998
Pockets: 3 · best druggability 0.55

Structure

1 distinct chain · 43% helix, 19% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Obg-like ATPase 1	protein	392	43% helix, 19% strand	O13998

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	144	0.55	0.81	29	empty
2	147	0.50	0.78	19	empty
3	86	0.38	0.76	16	empty

Compared structures

1NI3 · Structure of the Schizosaccharomyces pombe YchF GTPase · an experimental structure of the same protein · chain A against A, TM-score 0.90
1NI3 · Structure of the schizosaccharomyces pombe ychf GTPase · an experimental structure of the same protein · chain A against A, TM-score 0.90

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O13998
Elsewhere: UniProt O13998 · AlphaFold DB O13998

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