MolNFT v1 · #278260 · protein
AlphaFold monomer V2.0 prediction for nuclear RNA export factor 1 (Q9UBU9)
Q9UBU9: “AlphaFold monomer V2.0 prediction for nuclear RNA export factor 1 (Q9UBU9)”. 3 pockets (best druggability 0.30). MolNFT v1 #278260 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q9UBU9
- Type
- protein
- Length
- 619 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5998bFB2F22991b222F61c8c1535024ca911B6b8
- Molecule
- Nuclear RNA export factor 1
- UniProt
- Q9UBU9
- Pockets
- 3 · best druggability 0.30
Structure
1 distinct chain · 30% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nuclear RNA export factor 1 | protein | 619 | 30% helix, 17% strand | Q9UBU9 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 58 | 0.30 | 0.75 | 14 | empty |
| 2 | 58 | 0.30 | 0.75 | 12 | empty |
| 3 | 54 | 0.29 | 0.75 | 12 | empty |
Compared structures
- 4WYK · Structure of the lrr and NTF2-like domains of NXF1 complexed with NXT1 · an experimental structure of the same protein · chain A against C, TM-score 0.54
- 4WYK · Structure of the LRR and NTF2-like domains of NXF1 complexed with NXT1 · an experimental structure of the same protein · chain A against C, TM-score 0.54
- 3RW6 · Structure of nuclear RNA export factor TAP bound to CTE RNA · an experimental structure of the same protein · chain A against B, TM-score 0.38
- 3RW6 · Structure of nuclear RNA export factor tap bound to cte RNA · an experimental structure of the same protein · chain A against B, TM-score 0.38
- 6E5U · Crystal structure of the mRNA export receptor NXF1/NXT1 in complex with influenza virus… · an experimental structure of the same protein · chain A against A, TM-score 0.35
- 1JN5 · Structural basis for the recognition of a nucleoporin FG-repeat by the NTF2-like domain… · an experimental structure of the same protein · chain A against B, TM-score 0.28
- 1JN5 · Structural basis for the recognition of a nucleoporin fg- repeat by the NTF2-like domain… · an experimental structure of the same protein · chain A against B, TM-score 0.28
- 1JKG · Structural basis for the recognition of a nucleoporin FG-repeat by the NTF2-like domain… · an experimental structure of the same protein · chain A against B, TM-score 0.28
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9UBU9
- Elsewhere: UniProt Q9UBU9 · AlphaFold DB Q9UBU9
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.