MolNFT v1 · #277509 · protein
AlphaFold monomer V2.0 prediction for transcription TERMINATION/ANTITERMINATION protein nusa (P0AFF8)
P0AFF8: “AlphaFold monomer V2.0 prediction for transcription TERMINATION/ANTITERMINATION protein nusa (P0AFF8)”. 2 pockets (best druggability 0.37). MolNFT v1 #277509 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P0AFF8
- Type
- protein
- Length
- 495 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbff27Dc0a932A6E0d9Fe883AAbD1BF27bB95A69F
- Molecule
- Transcription TERMINATION/ANTITERMINATION protein nusa
- UniProt
- P0AFF8
- Pockets
- 2 · best druggability 0.37
Structure
1 distinct chain · 48% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transcription TERMINATION/ANTITERMINATION protein nusa | protein | 495 | 48% helix, 20% strand | P0AFF8 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 57 | 0.37 | 0.78 | 14 | empty |
| 2 | 77 | 0.35 | 0.76 | 14 | empty |
Compared structures
- 8URY · Escherichia coli transcription-translation coupled complex class B (TTC-B) containing… · an experimental structure of the same protein · chain A against AG, TM-score 0.73
- 6GOV · Structure of THE RNA POLYMERASE LAMBDA-BASED ANTITERMINATION COMPLEX · an experimental structure of the same protein · chain A against A, TM-score 0.62
- 6GOV · Structure of the RNA polymerase lambda-based antitermination complex · an experimental structure of the same protein · chain A against A, TM-score 0.62
- 5LM7 · Crystal structure of the lambda N-Nus factor complex · an experimental structure of the same protein · chain A against C, TM-score 0.62
- 5LM7 · Crystal structure of the lambda N-nus factor complex · an experimental structure of the same protein · chain A against C, TM-score 0.62
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0AFF8
- Elsewhere: UniProt P0AFF8 · AlphaFold DB P0AFF8
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