MolNFT v1 · #275775 · protein

AlphaFold monomer V2.0 prediction for NADH-quinone oxidoreductase subunit D (A1B495)

A1B495: “AlphaFold monomer V2.0 prediction for NADH-quinone oxidoreductase subunit D (A1B495)”. 2 pockets (best druggability 0.48). MolNFT v1 #275775 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: A1B495
Type: protein
Length: 412 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xc0F878C3f3E2a1874e2A6daC80d429e553DdB0D5
Molecule: NADH-quinone oxidoreductase subunit D
UniProt: A1B495
Pockets: 2 · best druggability 0.48

Structure

1 distinct chain · 48% helix, 13% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	NADH-quinone oxidoreductase subunit D	protein	412	48% helix, 13% strand	A1B495

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	63	0.48	0.84	22	empty
2	88	0.34	0.75	16	empty

Compared structures

8QBY · Respiratory complex I from Paracoccus denitrificans in MSP2N2 nanodiscs · an experimental structure of the same protein · chain A against D, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A1B495
Elsewhere: UniProt A1B495 · AlphaFold DB A1B495

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