MolNFT v1 · #275725 · protein
AlphaFold monomer V2.0 prediction for NADH-quinone oxidoreductase subunit D (B0SP85)
B0SP85: “AlphaFold monomer V2.0 prediction for NADH-quinone oxidoreductase subunit D (B0SP85)”. 4 pockets (best druggability 0.52). MolNFT v1 #275725 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- B0SP85
- Type
- protein
- Length
- 406 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5881B09f2D8e743400698633641fc1cD2Ed2BE6F
- Molecule
- NADH-quinone oxidoreductase subunit D
- UniProt
- B0SP85
- Pockets
- 4 · best druggability 0.52
Structure
1 distinct chain · 52% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH-quinone oxidoreductase subunit D | protein | 406 | 52% helix, 12% strand | B0SP85 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 66 | 0.52 | 0.86 | 18 | empty |
| 2 | 85 | 0.40 | 0.78 | 21 | empty |
| 3 | 99 | 0.40 | 0.76 | 15 | empty |
| 4 | 65 | 0.32 | 0.75 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B0SP85
- Elsewhere: UniProt B0SP85 · AlphaFold DB B0SP85
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