MolNFT v1 · #275721 · protein
AlphaFold monomer V2.0 prediction for NADH-quinone oxidoreductase subunit D (Q5WT23)
Q5WT23: “AlphaFold monomer V2.0 prediction for NADH-quinone oxidoreductase subunit D (Q5WT23)”. 5 pockets (best druggability 0.53). MolNFT v1 #275721 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q5WT23
- Type
- protein
- Length
- 417 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4Ef77Afb5a3D9F41c95Be3227D1CC986CCb61835
- Molecule
- NADH-quinone oxidoreductase subunit D
- UniProt
- Q5WT23
- Pockets
- 5 · best druggability 0.53
Structure
1 distinct chain · 52% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH-quinone oxidoreductase subunit D | protein | 417 | 52% helix, 12% strand | Q5WT23 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 77 | 0.53 | 0.85 | 23 | empty |
| 2 | 104 | 0.46 | 0.79 | 21 | empty |
| 3 | 72 | 0.38 | 0.78 | 13 | empty |
| 4 | 59 | 0.28 | 0.74 | 11 | empty |
| 5 | 56 | 0.28 | 0.74 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5WT23
- Elsewhere: UniProt Q5WT23 · AlphaFold DB Q5WT23
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