MolNFT v1 · #275572 · protein
AlphaFold monomer V2.0 prediction for NADH-quinone oxidoreductase subunit D (A1W4M5)
A1W4M5: “AlphaFold monomer V2.0 prediction for NADH-quinone oxidoreductase subunit D (A1W4M5)”. 4 pockets (best druggability 0.54). MolNFT v1 #275572 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- A1W4M5
- Type
- protein
- Length
- 417 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x61E65F88ec27E6A5EcEACd71FeF1FE2264bb3e71
- Molecule
- NADH-quinone oxidoreductase subunit D
- UniProt
- A1W4M5
- Pockets
- 4 · best druggability 0.54
Structure
1 distinct chain · 52% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH-quinone oxidoreductase subunit D | protein | 417 | 52% helix, 12% strand | A1W4M5 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 65 | 0.54 | 0.87 | 19 | empty |
| 2 | 86 | 0.34 | 0.74 | 18 | empty |
| 3 | 61 | 0.29 | 0.74 | 16 | empty |
| 4 | 51 | 0.28 | 0.75 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A1W4M5
- Elsewhere: UniProt A1W4M5 · AlphaFold DB A1W4M5
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