MolNFT v1 · #274195 · protein
AlphaFold monomer V2.0 prediction for NAD-capped RNA hydrolase nudc (Q5PKA4)
Q5PKA4: “AlphaFold monomer V2.0 prediction for NAD-capped RNA hydrolase nudc (Q5PKA4)”. 3 pockets (best druggability 0.65). MolNFT v1 #274195 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q5PKA4
- Type
- protein
- Length
- 257 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x738c1929c69B751bD0Be0B962D9bac20B631aAc6
- Molecule
- NAD-capped RNA hydrolase nudc
- UniProt
- Q5PKA4
- Pockets
- 3 · best druggability 0.65
Structure
1 distinct chain · 23% helix, 39% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NAD-capped RNA hydrolase nudc | protein | 257 | 23% helix, 39% strand | Q5PKA4 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 411 | 0.65 | 0.78 | 30 | empty |
| 2 | 109 | 0.48 | 0.80 | 16 | empty |
| 3 | 87 | 0.38 | 0.76 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5PKA4
- Elsewhere: UniProt Q5PKA4 · AlphaFold DB Q5PKA4
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