MolNFT v1 · #272310 · protein
AlphaFold monomer V2.0 prediction for NADH-ubiquinone oxidoreductase chain 2 (Q00540)
Q00540: “AlphaFold monomer V2.0 prediction for NADH-ubiquinone oxidoreductase chain 2 (Q00540)”. 3 pockets (best druggability 0.36). MolNFT v1 #272310 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q00540
- Type
- protein
- Length
- 347 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x564AA69Ea37cc6110e2E0826D8DB19f7e606b966
- Molecule
- NADH-ubiquinone oxidoreductase chain 2
- UniProt
- Q00540
- Pockets
- 3 · best druggability 0.36
Structure
1 distinct chain · 76% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH-ubiquinone oxidoreductase chain 2 | protein | 347 | 76% helix, 1% strand | Q00540 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 62 | 0.36 | 0.78 | 17 | empty |
| 2 | 64 | 0.34 | 0.77 | 14 | empty |
| 3 | 50 | 0.25 | 0.72 | 10 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q00540
- Elsewhere: UniProt Q00540 · AlphaFold DB Q00540
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