MolNFT v1 · #271959 · protein
AlphaFold monomer V2.0 prediction for NADH-ubiquinone oxidoreductase chain 1 (Q8M888)
Q8M888: “AlphaFold monomer V2.0 prediction for NADH-ubiquinone oxidoreductase chain 1 (Q8M888)”. 5 pockets (best druggability 0.78). MolNFT v1 #271959 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q8M888
- Type
- protein
- Length
- 318 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xC1C81C5d9568Be2795E0Bd2e795B6bD277CaDb67
- Molecule
- NADH-ubiquinone oxidoreductase chain 1
- UniProt
- Q8M888
- Pockets
- 5 · best druggability 0.78
Structure
1 distinct chain · 69% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH-ubiquinone oxidoreductase chain 1 | protein | 318 | 69% helix, 1% strand | Q8M888 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 135 | 0.78 | 0.96 | 31 | empty |
| 2 | 262 | 0.57 | 0.78 | 29 | empty |
| 3 | 187 | 0.51 | 0.77 | 27 | empty |
| 4 | 58 | 0.35 | 0.77 | 10 | empty |
| 5 | 73 | 0.31 | 0.74 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8M888
- Elsewhere: UniProt Q8M888 · AlphaFold DB Q8M888
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