MolNFT v1 · #270559 · protein
AlphaFold monomer V2.0 prediction for sphingomyelin phosphodiesterase 5 (F1QG30)
F1QG30: “AlphaFold monomer V2.0 prediction for sphingomyelin phosphodiesterase 5 (F1QG30)”. 11 pockets (best druggability 0.59). MolNFT v1 #270559 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- F1QG30
- Type
- protein
- Length
- 545 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x16DAa6a077550712A5E3955F590a002aC60F6B0D
- Molecule
- Sphingomyelin phosphodiesterase 5
- UniProt
- F1QG30
- Pockets
- 11 · best druggability 0.59
Structure
1 distinct chain · 32% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sphingomyelin phosphodiesterase 5 | protein | 545 | 32% helix, 21% strand | F1QG30 |
Pockets
11 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 155 | 0.59 | 0.82 | 27 | empty |
| 2 | 197 | 0.56 | 0.79 | 32 | empty |
| 3 | 237 | 0.54 | 0.77 | 29 | empty |
| 4 | 71 | 0.50 | 0.85 | 23 | empty |
| 5 | 110 | 0.47 | 0.79 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt F1QG30
- Elsewhere: UniProt F1QG30 · AlphaFold DB F1QG30
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