MolNFT v1 · #270558 · protein
AlphaFold monomer V2.0 prediction for sphingomyelin phosphodiesterase 4 (Q5XHG1)
Q5XHG1: “AlphaFold monomer V2.0 prediction for sphingomyelin phosphodiesterase 4 (Q5XHG1)”. 15 pockets (best druggability 0.73). MolNFT v1 #270558 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q5XHG1
- Type
- protein
- Length
- 824 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x71112d4fF7ebb3b617963c05f052289e073082FD
- Molecule
- Sphingomyelin phosphodiesterase 4
- UniProt
- Q5XHG1
- Pockets
- 15 · best druggability 0.73
Structure
1 distinct chain · 54% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sphingomyelin phosphodiesterase 4 | protein | 824 | 54% helix, 3% strand | Q5XHG1 |
Pockets
15 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 620 | 0.73 | 0.80 | 51 | empty |
| 2 | 837 | 0.71 | 0.76 | 58 | empty |
| 3 | 682 | 0.67 | 0.76 | 66 | empty |
| 4 | 344 | 0.62 | 0.78 | 40 | empty |
| 5 | 360 | 0.56 | 0.75 | 50 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5XHG1
- Elsewhere: UniProt Q5XHG1 · AlphaFold DB Q5XHG1
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