MolNFT v1 · #267899 · protein
AlphaFold monomer V2.0 prediction for neuronal pas domain-containing protein 4 (Q8BGD7)
Q8BGD7: “AlphaFold monomer V2.0 prediction for neuronal pas domain-containing protein 4 (Q8BGD7)”. 4 pockets (best druggability 0.77). MolNFT v1 #267899 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q8BGD7
- Type
- protein
- Length
- 802 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xeF890c906081dACC6118015C44e06276C1867C34
- Molecule
- Neuronal pas domain-containing protein 4
- UniProt
- Q8BGD7
- Pockets
- 4 · best druggability 0.77
Structure
1 distinct chain · 23% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Neuronal pas domain-containing protein 4 | protein | 802 | 23% helix, 10% strand | Q8BGD7 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 950 | 0.77 | 0.80 | 86 | empty |
| 2 | 1064 | 0.74 | 0.77 | 92 | empty |
| 3 | 155 | 0.48 | 0.77 | 26 | empty |
| 4 | 68 | 0.34 | 0.76 | 18 | empty |
Compared structures
- 7XHV · Crystal Structure of the NPAS4-ARNT heterodimer in complex with DNA · an experimental structure of the same protein · chain A against B, TM-score 0.23
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8BGD7
- Elsewhere: UniProt Q8BGD7 · AlphaFold DB Q8BGD7
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