MolNFT v1 · #267897 · protein
AlphaFold monomer V2.0 prediction for neuronal pas domain-containing protein 3 (Q9QZQ0)
Q9QZQ0: “AlphaFold monomer V2.0 prediction for neuronal pas domain-containing protein 3 (Q9QZQ0)”. 4 pockets (best druggability 0.73). MolNFT v1 #267897 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q9QZQ0
- Type
- protein
- Length
- 925 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6DAA77C4263E74E745cA9c4D8E291e57e8991Cf5
- Molecule
- Neuronal pas domain-containing protein 3
- UniProt
- Q9QZQ0
- Pockets
- 4 · best druggability 0.73
Structure
1 distinct chain · 17% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Neuronal pas domain-containing protein 3 | protein | 925 | 17% helix, 10% strand | Q9QZQ0 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 807 | 0.73 | 0.78 | 77 | empty |
| 2 | 670 | 0.72 | 0.79 | 50 | empty |
| 3 | 120 | 0.43 | 0.76 | 20 | empty |
| 4 | 55 | 0.37 | 0.79 | 11 | empty |
Compared structures
- 5SY7 · Crystal structure of the heterodimeric NPAS3-arnt complex with hre DNA · an experimental structure of the same protein · chain A against B, TM-score 0.30
- 5SY7 · Crystal Structure of the Heterodimeric NPAS3-ARNT Complex with HRE DNA · an experimental structure of the same protein · chain A against B, TM-score 0.30
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9QZQ0
- Elsewhere: UniProt Q9QZQ0 · AlphaFold DB Q9QZQ0
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