MolNFT v1 · #267892 · protein
AlphaFold monomer V2.0 prediction for neuronal pas domain-containing protein 1 (P97459)
P97459: “AlphaFold monomer V2.0 prediction for neuronal pas domain-containing protein 1 (P97459)”. 4 pockets (best druggability 0.74). MolNFT v1 #267892 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P97459
- Type
- protein
- Length
- 594 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xDAaB27434aDA8f5F5E5A6A9379845f7Dfb328c8b
- Molecule
- Neuronal pas domain-containing protein 1
- UniProt
- P97459
- Pockets
- 4 · best druggability 0.74
Structure
1 distinct chain · 23% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Neuronal pas domain-containing protein 1 | protein | 594 | 23% helix, 14% strand | P97459 |
Pockets
4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 717 | 0.74 | 0.79 | 60 | empty |
| 2 | 374 | 0.62 | 0.78 | 38 | empty |
| 3 | 115 | 0.51 | 0.81 | 23 | empty |
| 4 | 67 | 0.32 | 0.76 | 18 | empty |
Compared structures
- 5SY5 · Crystal structure of the heterodimeric NPAS1-arnt complex · an experimental structure of the same protein · chain A against F, TM-score 0.47
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P97459
- Elsewhere: UniProt P97459 · AlphaFold DB P97459
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