MolNFT v1 · #266988 · protein
AlphaFold monomer V2.0 prediction for noelin (O88998)
O88998: “AlphaFold monomer V2.0 prediction for noelin (O88998)”. 5 pockets (best druggability 0.80). MolNFT v1 #266988 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- O88998
- Type
- protein
- Length
- 485 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB44F19a0cb161828322eEEd13F55d4C3C34938d2
- Molecule
- Noelin
- UniProt
- O88998
- Pockets
- 5 · best druggability 0.80
Structure
1 distinct chain · 33% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Noelin | protein | 485 | 33% helix, 30% strand | O88998 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 897 | 0.80 | 0.82 | 75 | empty |
| 2 | 192 | 0.58 | 0.81 | 31 | empty |
| 3 | 87 | 0.52 | 0.84 | 17 | empty |
| 4 | 72 | 0.37 | 0.78 | 18 | empty |
| 5 | 52 | 0.27 | 0.74 | 12 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 6QM3 · Crystal structure of a calcium- and sodium-bound mouse olfactomedin-1 disulfide-linked… · an experimental structure of the same protein · chain A against A, TM-score 0.55
- 6QM3 · Crystal structure of a calcium- and sodium-bound mouse Olfactomedin-1 disulfide-linked… · an experimental structure of the same protein · chain A against A, TM-score 0.55
- 5AMO · Structure of a mouse Olfactomedin-1 disulfide-linked dimer of the Olfactomedin domain and… · an experimental structure of the same protein · chain A against B, TM-score 0.53
- 5AMO · Structure of a mouse olfactomedin-1 disulfide-linked dimer of the olfactomedin domain and… · an experimental structure of the same protein · chain A against B, TM-score 0.53
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O88998
- Elsewhere: UniProt O88998 · AlphaFold DB O88998
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