MolNFT v1 · #266613 · protein

AlphaFold monomer V2.0 prediction for bifunctional NAD(P)H-hydrate repair enzyme nnr (P56176)

P56176: “AlphaFold monomer V2.0 prediction for bifunctional NAD(P)H-hydrate repair enzyme nnr (P56176)”. 4 pockets (best druggability 0.64). MolNFT v1 #266613 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: P56176
Type: protein
Length: 466 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x133CEeEaaE94bD85f7dDfB92dd226C748EAE2Ac5
Molecule: Bifunctional NAD(P)H-hydrate repair enzyme nnr
UniProt: P56176
Pockets: 4 · best druggability 0.64

Structure

1 distinct chain · 38% helix, 20% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Bifunctional NAD(P)H-hydrate repair enzyme nnr	protein	466	38% helix, 20% strand	P56176

Pockets

4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	235	0.64	0.83	29	empty
2	129	0.63	0.87	28	empty
3	183	0.51	0.78	29	empty
4	58	0.28	0.74	14	empty

Compared structures

3K5W · Crystal structure of a Carbohydrate kinase (YjeF family)from Helicobacter pylori · an experimental structure of the same protein · chain A against A, TM-score 0.98
3K5W · Crystal structure of a carbohydrate kinase (yjef FAMILY)FROM helicobacter pylori · an experimental structure of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P56176
Elsewhere: UniProt P56176 · AlphaFold DB P56176

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