MolNFT v1 · #264979 · protein
AlphaFold monomer V2.0 prediction for nitrogenase molybdenum-iron protein alpha chain (P00466)
P00466: “AlphaFold monomer V2.0 prediction for nitrogenase molybdenum-iron protein alpha chain (P00466)”. 3 pockets (best druggability 0.79). MolNFT v1 #264979 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P00466
- Type
- protein
- Length
- 483 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xEC4315276CF5E0975da2A0E3aB9F358edD5f0BF4
- Molecule
- Nitrogenase molybdenum-iron protein alpha chain
- UniProt
- P00466
- Pockets
- 3 · best druggability 0.79
Structure
1 distinct chain · 49% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nitrogenase molybdenum-iron protein alpha chain | protein | 483 | 49% helix, 15% strand | P00466 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 464 | 0.79 | 0.87 | 59 | empty |
| 2 | 95 | 0.39 | 0.77 | 12 | empty |
| 3 | 70 | 0.35 | 0.76 | 15 | empty |
Compared structures
- 1QH8 · Nitrogenase mofe protein from klebsiella pneumoniae, as-crystallized (mixed oxidation)… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1QH8 · Nitrogenase mofe protein from klebsiella pneumoniae, as-crystallized (mixed oxidation)… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1QGU · Nitrogenase mo-fe protein from klebsiella pneumoniae, dithionite-reduced state · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1QGU · Nitrogenase mo-fe protein from klebsiella pneumoniae, dithionite-reduced state · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1H1L · Nitrogenase mo-fe protein from klebsiella pneumoniae, nifv mutant · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1H1L · Nitrogenase mo-fe protein from klebsiella pneumoniae, nifv mutant · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1QH1 · Nitrogenase mofe protein from klebsiella pneumoniae, phenosafranin oxidized state · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1QH1 · Nitrogenase mofe protein from klebsiella pneumoniae, phenosafranin oxidized state · an experimental structure of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00466
- Elsewhere: UniProt P00466 · AlphaFold DB P00466
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