MolNFT v1 · #264921 · protein
AlphaFold monomer V2.0 prediction for nidogen-1 (P08460)
P08460: “AlphaFold monomer V2.0 prediction for nidogen-1 (P08460)”. 3 pockets (best druggability 0.42). MolNFT v1 #264921 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P08460
- Type
- protein
- Length
- 324 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x126FAC61adfcCB9Aa6cE867C9C038cCe03399896
- Molecule
- Nidogen-1
- UniProt
- P08460
- Pockets
- 3 · best druggability 0.42
Structure
1 distinct chain · 11% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nidogen-1 | protein | 324 | 11% helix, 27% strand | P08460 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 77 | 0.42 | 0.80 | 16 | empty |
| 2 | 104 | 0.38 | 0.75 | 23 | empty |
| 3 | 50 | 0.30 | 0.76 | 12 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P08460
- Elsewhere: UniProt P08460 · AlphaFold DB P08460
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