MolNFT v1 · #262654 · protein
AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial (Q9FGI6)
Q9FGI6: “AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial…”. 6 pockets (best druggability 0.64). MolNFT v1 #262654 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q9FGI6
- Type
- protein
- Length
- 748 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x40B9C9d5F084D34d026E9d5Dd10501AcdF6d6152
- Molecule
- NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial
- UniProt
- Q9FGI6
- Pockets
- 6 · best druggability 0.64
Structure
1 distinct chain · 29% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial | protein | 748 | 29% helix, 17% strand | Q9FGI6 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 482 | 0.64 | 0.77 | 56 | empty |
| 2 | 281 | 0.57 | 0.77 | 39 | empty |
| 3 | 209 | 0.55 | 0.79 | 27 | empty |
| 4 | 143 | 0.47 | 0.78 | 31 | empty |
| 5 | 61 | 0.39 | 0.80 | 15 | empty |
Compared structures
- 7ARB · Cryo-EM structure of Arabidopsis thaliana Complex-I (complete composition) · an experimental structure of the same protein · chain A against G, TM-score 0.92
- 7ARB · Cryo-EM structure of arabidopsis thaliana complex-I (complete composition) · an experimental structure of the same protein · chain A against G, TM-score 0.92
- 7AQR · Cryo-EM structure of arabidopsis thaliana complex-I (peripheral arm) · an experimental structure of the same protein · chain A against G, TM-score 0.92
- 7AQR · Cryo-EM structure of Arabidopsis thaliana Complex-I (peripheral arm) · an experimental structure of the same protein · chain A against G, TM-score 0.92
- 7AR7 · Cryo-EM structure of arabidopsis thaliana complex-I (open conformation) · an experimental structure of the same protein · chain A against G, TM-score 0.91
- 7AR7 · Cryo-EM structure of Arabidopsis thaliana complex-I (open conformation) · an experimental structure of the same protein · chain A against G, TM-score 0.91
- 8BQ6 · Cryo-EM structure of the Arabidopsis thaliana I+III2 supercomplex (Complete conformation… · an experimental structure of the same protein · chain A against G, TM-score 0.91
- 8BQ5 · Cryo-EM structure of the Arabidopsis thaliana I+III2 supercomplex (Complete conformation… · an experimental structure of the same protein · chain A against G, TM-score 0.91
- 8BED · Cryo-EM structure of the Arabidopsis thaliana I+III2 supercomplex (CI peripheral tip) · an experimental structure of the same protein · chain A against G, TM-score 0.91
- 8BPX · Cryo-EM structure of the Arabidopsis thaliana I+III2 supercomplex (Complete composition) · an experimental structure of the same protein · chain A against G, TM-score 0.91
- 7AR8 · Cryo-EM structure of arabidopsis thaliana complex-I (closed conformation) · an experimental structure of the same protein · chain A against G, TM-score 0.91
- 7AR8 · Cryo-EM structure of Arabidopsis thaliana complex-I (closed conformation) · an experimental structure of the same protein · chain A against G, TM-score 0.91
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9FGI6
- Elsewhere: UniProt Q9FGI6 · AlphaFold DB Q9FGI6
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.