MolNFT v1 · #262481 · protein
AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial (P91929)
P91929: “AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10…”. 5 pockets (best druggability 0.67). MolNFT v1 #262481 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P91929
- Type
- protein
- Length
- 407 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x80D2ac0F5e3268bC5C1d28BBAA07E3169BB02b79
- Molecule
- NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial
- UniProt
- P91929
- Pockets
- 5 · best druggability 0.67
Structure
1 distinct chain · 44% helix, 6% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial | protein | 407 | 44% helix, 6% strand | P91929 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 281 | 0.67 | 0.83 | 33 | empty |
| 2 | 636 | 0.66 | 0.75 | 55 | empty |
| 3 | 126 | 0.51 | 0.80 | 19 | empty |
| 4 | 140 | 0.42 | 0.75 | 23 | empty |
| 5 | 78 | 0.34 | 0.75 | 18 | empty |
Compared structures
- 8ESZ · Structure of mitochondrial complex I from Drosophila melanogaster, Helix-locked state · an experimental structure of the same protein · chain A against AL, TM-score 0.88
- 8ESW · Structure of mitochondrial complex I from Drosophila melanogaster, Flexible-class 1 · an experimental structure of the same protein · chain A against AL, TM-score 0.88
- 8B9Z · Drosophila melanogaster complex I in the Active state (Dm1) · an experimental structure of the same protein · chain A against O, TM-score 0.88
- 8BA0 · Drosophila melanogaster complex I in the Twisted state (Dm2) · an experimental structure of the same protein · chain A against O, TM-score 0.87
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P91929
- Elsewhere: UniProt P91929 · AlphaFold DB P91929
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