MolNFT v1 · #260617 · protein

AlphaFold monomer V2.0 prediction for NAD(P)H-quinone oxidoreductase subunit H, chloroplastic (P56753)

P56753: “AlphaFold monomer V2.0 prediction for NAD(P)H-quinone oxidoreductase subunit H, chloroplastic (P56753)”. 3 pockets (best druggability 0.61). MolNFT v1 #260617 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: P56753
Type: protein
Length: 393 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xa52b97c937eA9921ce330C979Ff59b62a0F55FC8
Molecule: NAD(P)H-quinone oxidoreductase subunit H, chloroplastic
UniProt: P56753
Pockets: 3 · best druggability 0.61

Structure

1 distinct chain · 49% helix, 12% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic	protein	393	49% helix, 12% strand	P56753

Pockets

3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	254	0.61	0.80	31	empty
2	79	0.55	0.86	19	empty
3	86	0.34	0.75	14	empty

Compared structures

7WG5 · Cyclic electron transport supercomplex NDH-PSI from Arabidopsis · an experimental structure of the same protein · chain A against H, TM-score 0.88
7WFG · Subcomplexes a and E in ndh complex from arabidopsis · an experimental structure of the same protein · chain A against H, TM-score 0.88
7WFG · Subcomplexes A and E in NDH complex from Arabidopsis · an experimental structure of the same protein · chain A against H, TM-score 0.88

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P56753
Elsewhere: UniProt P56753 · AlphaFold DB P56753

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