MolNFT v1 · #260092 · protein
AlphaFold monomer V2.0 prediction for probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic (Q9C6Z1)
Q9C6Z1: “AlphaFold monomer V2.0 prediction for probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic (Q9C6Z1)”. 5 pockets (best druggability 0.81). MolNFT v1 #260092 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q9C6Z1
- Type
- protein
- Length
- 589 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xA15011e6fCb04bD3567F1C0feB9323b96C9D1706
- Molecule
- Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic
- UniProt
- Q9C6Z1
- Pockets
- 5 · best druggability 0.81
Structure
1 distinct chain · 12% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic | protein | 589 | 12% helix, 31% strand | Q9C6Z1 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1152 | 0.81 | 0.82 | 97 | empty |
| 2 | 461 | 0.76 | 0.85 | 43 | empty |
| 3 | 376 | 0.60 | 0.76 | 35 | empty |
| 4 | 158 | 0.47 | 0.77 | 24 | empty |
| 5 | 53 | 0.27 | 0.74 | 10 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9C6Z1
- Elsewhere: UniProt Q9C6Z1 · AlphaFold DB Q9C6Z1
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