MolNFT v1 · #260082 · protein

AlphaFold monomer V2.0 prediction for 9-cis-epoxycarotenoid dioxygenase 1, chloroplastic (O24592)

O24592: “AlphaFold monomer V2.0 prediction for 9-cis-epoxycarotenoid dioxygenase 1, chloroplastic (O24592)”. 4 pockets (best druggability 0.82). MolNFT v1 #260082 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: O24592
Type: protein
Length: 604 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x80D2ac0F5e3268bC5C1d28BBAA07E3169BB02b79
Molecule: 9-cis-epoxycarotenoid dioxygenase 1, chloroplastic
UniProt: O24592
Pockets: 4 · best druggability 0.82

Structure

1 distinct chain · 12% helix, 31% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	9-cis-epoxycarotenoid dioxygenase 1, chloroplastic	protein	604	12% helix, 31% strand	O24592

Pockets

4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1036	0.82	0.83	90	empty
2	397	0.78	0.87	51	empty
3	124	0.47	0.79	27	empty
4	119	0.42	0.76	18	empty

Compared structures

3NPE · Structure of VP14 in complex with oxygen · an experimental structure of the same protein · chain A against A, TM-score 0.85
3NPE · Structure of VP14 in complex with oxygen · an experimental structure of the same protein · chain A against A, TM-score 0.85

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O24592
Elsewhere: UniProt O24592 · AlphaFold DB O24592

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