MolNFT v1 · #252062 · protein
AlphaFold monomer V2.0 prediction for udp-N-acetylmuramoyl-tripeptide --D-alanyl-D-alanine ligase (Q89AQ1)
Q89AQ1 · Udp-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase: “AlphaFold monomer V2.0 prediction for udp-N-acetylmuramoyl-tripeptide --D-alanyl-D-alanine ligase (Q89AQ1)”. 3 pockets (best druggability 0.76). MolNFT v1 #252062 on…
- Accession
- Q89AQ1
- Type
- protein
- Length
- 460 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x213e8bCc83C1146cc6838177a90617A33039bB6A
- Molecule
- Udp-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
- UniProt
- Q89AQ1
- Pockets
- 3 · best druggability 0.76
Structure
1 distinct chain · 40% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Udp-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase | protein | 460 | 40% helix, 24% strand | Q89AQ1 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 698 | 0.76 | 0.81 | 90 | empty |
| 2 | 71 | 0.30 | 0.73 | 16 | empty |
| 3 | 62 | 0.27 | 0.73 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q89AQ1
- Elsewhere: UniProt Q89AQ1 · AlphaFold DB Q89AQ1
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