MolNFT v1 · #252056 · protein

AlphaFold monomer V2.0 prediction for udp-N-acetylmuramoyl-L-alanyl- D-glutamate--2,6-diaminopimelate ligase (Q87AF5)

Q87AF5 · Udp-N-acetylmuramoyl-L-alanyl-D-glutamate…: “AlphaFold monomer V2.0 prediction for udp-N-acetylmuramoyl-L-alanyl- D-glutamate--2,6-diaminopimelate ligase…”. 2 pockets (best druggability 0.74). MolNFT v1 #252056 on GenesisL1: 3D…

Accession: Q87AF5
Type: protein
Length: 495 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xf210F5B89b6A859c8E395243D7942e4739F3DC69
Molecule: Udp-N-acetylmuramoyl-L-alanyl-D-glutamate-- 2,6-diaminopimelate ligase
UniProt: Q87AF5
Pockets: 2 · best druggability 0.74

Structure

1 distinct chain · 36% helix, 23% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Udp-N-acetylmuramoyl-L-alanyl-D-glutamate-- 2,6-diaminopimelate ligase	protein	495	36% helix, 23% strand	Q87AF5

Pockets

2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	668	0.74	0.81	86	empty
2	319	0.59	0.77	43	empty

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q87AF5
Elsewhere: UniProt Q87AF5 · AlphaFold DB Q87AF5

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