MolNFT v1 · #252048 · protein
AlphaFold monomer V2.0 prediction for udp-N-acetylmuramoyl-L-alanyl- D-glutamate--2,6-diaminopimelate ligase (Q8D2Z1)
Q8D2Z1 · Udp-N-acetylmuramoyl-L-alanyl-D-glutamate…: “AlphaFold monomer V2.0 prediction for udp-N-acetylmuramoyl-L-alanyl- D-glutamate--2,6-diaminopimelate ligase…”. 3 pockets (best druggability 0.74). MolNFT v1 #252048 on GenesisL1: 3D…
- Accession
- Q8D2Z1
- Type
- protein
- Length
- 496 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x46EfCa788d03A3e879DAcDb96552AB8Bbc7e20b3
- Molecule
- Udp-N-acetylmuramoyl-L-alanyl-D-glutamate-- 2,6-diaminopimelate ligase
- UniProt
- Q8D2Z1
- Pockets
- 3 · best druggability 0.74
Structure
1 distinct chain · 36% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Udp-N-acetylmuramoyl-L-alanyl-D-glutamate-- 2,6-diaminopimelate ligase | protein | 496 | 36% helix, 27% strand | Q8D2Z1 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 702 | 0.74 | 0.80 | 81 | empty |
| 2 | 307 | 0.53 | 0.74 | 39 | empty |
| 3 | 101 | 0.36 | 0.74 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8D2Z1
- Elsewhere: UniProt Q8D2Z1 · AlphaFold DB Q8D2Z1
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