MolNFT v1 · #251980 · protein
AlphaFold monomer V2.0 prediction for udp-N-acetylmuramoyl-L-alanyl- D-glutamate--2,6-diaminopimelate ligase (Q4UMI9)
Q4UMI9 · Udp-N-acetylmuramoyl-L-alanyl-D-glutamate…: “AlphaFold monomer V2.0 prediction for udp-N-acetylmuramoyl-L-alanyl- D-glutamate--2,6-diaminopimelate ligase…”. 6 pockets (best druggability 0.71). MolNFT v1 #251980 on GenesisL1: 3D…
- Accession
- Q4UMI9
- Type
- protein
- Length
- 530 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xD8181c44e77460dc4278886267608d4Cf45E86B0
- Molecule
- Udp-N-acetylmuramoyl-L-alanyl-D-glutamate-- 2,6-diaminopimelate ligase
- UniProt
- Q4UMI9
- Pockets
- 6 · best druggability 0.71
Structure
1 distinct chain · 35% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Udp-N-acetylmuramoyl-L-alanyl-D-glutamate-- 2,6-diaminopimelate ligase | protein | 530 | 35% helix, 20% strand | Q4UMI9 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 510 | 0.71 | 0.81 | 69 | empty |
| 2 | 358 | 0.57 | 0.75 | 41 | empty |
| 3 | 201 | 0.56 | 0.79 | 24 | empty |
| 4 | 59 | 0.32 | 0.76 | 16 | empty |
| 5 | 56 | 0.32 | 0.76 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4UMI9
- Elsewhere: UniProt Q4UMI9 · AlphaFold DB Q4UMI9
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