MolNFT v1 · #251974 · protein
AlphaFold monomer V2.0 prediction for udp-N-acetylmuramoyl-L-alanyl- D-glutamate--2,6-diaminopimelate ligase (Q87WY0)
Q87WY0 · Udp-N-acetylmuramoyl-L-alanyl-D-glutamate…: “AlphaFold monomer V2.0 prediction for udp-N-acetylmuramoyl-L-alanyl- D-glutamate--2,6-diaminopimelate ligase…”. 4 pockets (best druggability 0.72). MolNFT v1 #251974 on GenesisL1: 3D…
- Accession
- Q87WY0
- Type
- protein
- Length
- 487 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xaa53776A41fB2e67da75A96E8a53746b6874aAB4
- Molecule
- Udp-N-acetylmuramoyl-L-alanyl-D-glutamate-- 2,6-diaminopimelate ligase
- UniProt
- Q87WY0
- Pockets
- 4 · best druggability 0.72
Structure
1 distinct chain · 37% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Udp-N-acetylmuramoyl-L-alanyl-D-glutamate-- 2,6-diaminopimelate ligase | protein | 487 | 37% helix, 24% strand | Q87WY0 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 442 | 0.72 | 0.82 | 60 | empty |
| 2 | 262 | 0.64 | 0.82 | 38 | empty |
| 3 | 281 | 0.50 | 0.74 | 44 | empty |
| 4 | 51 | 0.32 | 0.77 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q87WY0
- Elsewhere: UniProt Q87WY0 · AlphaFold DB Q87WY0
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