MolNFT v1 · #251894 · protein
AlphaFold monomer V2.0 prediction for udp-N-acetylmuramoyl-L-alanyl- D-glutamate--2,6-diaminopimelate ligase (O84271)
O84271 · Udp-N-acetylmuramoyl-L-alanyl-D-glutamate…: “AlphaFold monomer V2.0 prediction for udp-N-acetylmuramoyl-L-alanyl- D-glutamate--2,6-diaminopimelate ligase…”. 3 pockets (best druggability 0.76). MolNFT v1 #251894 on GenesisL1: 3D…
- Accession
- O84271
- Type
- protein
- Length
- 483 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x238B8466Cc6e82De2dd22E1538b30851731E0B10
- Molecule
- Udp-N-acetylmuramoyl-L-alanyl-D-glutamate-- 2,6-diaminopimelate ligase
- UniProt
- O84271
- Pockets
- 3 · best druggability 0.76
Structure
1 distinct chain · 35% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Udp-N-acetylmuramoyl-L-alanyl-D-glutamate-- 2,6-diaminopimelate ligase | protein | 483 | 35% helix, 24% strand | O84271 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 783 | 0.76 | 0.81 | 77 | empty |
| 2 | 118 | 0.40 | 0.75 | 21 | empty |
| 3 | 69 | 0.33 | 0.75 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O84271
- Elsewhere: UniProt O84271 · AlphaFold DB O84271
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