MolNFT v1 · #251548 · protein

AlphaFold monomer V2.0 prediction for udp-N-acetylmuramoylalanine-- D-glutamate ligase (Q8X9Y9)

Q8X9Y9 · Udp-N-acetylmuramoylalanine--D-glutamate ligase: “AlphaFold monomer V2.0 prediction for udp-N-acetylmuramoylalanine-- D-glutamate ligase (Q8X9Y9)”. 3 pockets (best druggability 0.73). MolNFT v1 #251548 on GenesisL1: 3D structure…

Accession: Q8X9Y9
Type: protein
Length: 438 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xd10960F956646DE8b64d3598984c91C2d5Af3D7b
Molecule: Udp-N-acetylmuramoylalanine--D-glutamate ligase
UniProt: Q8X9Y9
Pockets: 3 · best druggability 0.73

Structure

1 distinct chain · 34% helix, 22% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Udp-N-acetylmuramoylalanine--D-glutamate ligase	protein	438	34% helix, 22% strand	Q8X9Y9

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	675	0.73	0.80	92	empty
2	73	0.34	0.75	16	empty
3	50	0.26	0.74	11	empty

Compared structures

2XPC · Second-generation sulfonamide inhibitors of murd: activity optimisation with… · an experimental structure of the same protein · chain A against A, TM-score 0.92
2XPC · Second-generation sulfonamide inhibitors of MurD: Activity optimisation with… · an experimental structure of the same protein · chain A against A, TM-score 0.92

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8X9Y9
Elsewhere: UniProt Q8X9Y9 · AlphaFold DB Q8X9Y9

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