MolNFT v1 · #251498 · protein
AlphaFold monomer V2.0 prediction for udp-N-acetylmuramoylalanine-- D-glutamate ligase (B5EBP9)
B5EBP9 · Udp-N-acetylmuramoylalanine--D-glutamate ligase: “AlphaFold monomer V2.0 prediction for udp-N-acetylmuramoylalanine-- D-glutamate ligase (B5EBP9)”. 4 pockets (best druggability 0.67). MolNFT v1 #251498 on GenesisL1: 3D structure…
- Accession
- B5EBP9
- Type
- protein
- Length
- 452 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBF0D2e107Ce1EcD2C4369B042274201DB719AaAF
- Molecule
- Udp-N-acetylmuramoylalanine--D-glutamate ligase
- UniProt
- B5EBP9
- Pockets
- 4 · best druggability 0.67
Structure
1 distinct chain · 37% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Udp-N-acetylmuramoylalanine--D-glutamate ligase | protein | 452 | 37% helix, 23% strand | B5EBP9 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 501 | 0.67 | 0.78 | 51 | empty |
| 2 | 263 | 0.62 | 0.81 | 37 | empty |
| 3 | 55 | 0.49 | 0.86 | 20 | empty |
| 4 | 55 | 0.25 | 0.73 | 12 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5EBP9
- Elsewhere: UniProt B5EBP9 · AlphaFold DB B5EBP9
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